STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C10orf88Uncharacterized protein C10orf88 homolog isoform X1. (535 aa)    
Predicted Functional Partners:
AGAP2
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 isoform X1.
      
 0.657
TENT4A
Non-canonical poly(A) RNA polymerase PAPD7 isoform X1.
      
 0.657
TLCD3A
Protein FAM57A.
      
 0.657
UTP3
U3 small nucleolar RNA-associated protein 3.
      
 0.657
BAZ1B
Bromodomain adjacent to zinc finger domain protein 1B.
      
 0.558
TEX9
Testis expressed 9.
      
 0.522
PNPLA6
Lysophospholipid hydrolase.
      
 0.472
TERF2
Telomeric repeat binding factor 2.
      
 0.472
MXI1
Max-interacting protein 1 isoform X1.
      
 0.471
ADGRL4
Adhesion G protein-coupled receptor L4 isoform X1.
      
 0.451
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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