STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPICPeptidyl-prolyl isomerase C (cyclophilin C). (217 aa)    
Predicted Functional Partners:
SERPINH1
Serpin peptidase inhibitor, clade H, member 1.
   
 
 0.827
CRTAP
Cartilage-associated protein.
   
 0.774
P3H4
Synaptonemal complex protein SC65 isoform X1.
   
 0.774
FBN1
Fibrillin-1 isoform X1.
   
 0.723
FBL
RRNA 2'-O-methyltransferase fibrillarin.
   
 
 0.711
PRDX6
Peroxiredoxin 6.
   
 
 0.703
HSPA5
Endoplasmic reticulum chaperone BiP.
   
 0.698
MINAR1
UPF0258 protein KIAA1024 homolog.
      
 0.690
HSP90B1
Heat shock protein 90kDa beta.
  
 0.632
NCAN
Neurocan core protein isoform X1.
    
 0.629
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.