STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM6Putative histone-lysine N-methyltransferase PRDM6. (563 aa)    
Predicted Functional Partners:
CAMKMT
Calmodulin-lysine N-methyltransferase isoform X1.
     
  0.900
PLOD3
Lysyl hydroxylase/galactosyltransferase/glucosyltransferase.
     
  0.650
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
     
  0.650
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
     
  0.650
NSD2
Histone-lysine N-methyltransferase NSD2 isoform X1.
    
 0.623
CBFA2T2
CBFA2/RUNX1 translocation partner 2.
    
   0.587
PRDM14
PR/SET domain 14.
    
 
0.585
PIGY
Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y.
      
 0.416
SMYD2
[histone H3]-lysine4/36 N-trimethyltransferase SMYD.
    
 0.407
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.