Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A1CFAPOBEC1 complementation factor isoform X1. (580 aa)    
Predicted Functional Partners:
APOBEC4
Putative C->U-editing enzyme APOBEC-4.
     
 0.806
APOBEC2
C->U-editing enzyme APOBEC-2.
     
 0.777
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 0.754
RRM1
Ribonucleoside-diphosphate reductase large subunit.
   
  
 0.697
APOB
LOW QUALITY PROTEIN: apolipoprotein B-100.
   
  
 0.696
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
   
 
 0.652
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L-like.
   
 0.632
ECH1
Heterogeneous nuclear ribonucleoprotein L.
   
 0.632
PLA2R1
Secretory phospholipase A2 receptor.
      
 0.615
PSMG2
Proteasome assembly chaperone 2.
    
   0.604
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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