STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABT1Activator of basal transcription 1. (282 aa)    
Predicted Functional Partners:
RRP36
Ribosomal RNA processing protein 36 homolog.
   
 
 0.984
KRR1
KRR1 small subunit processome component homolog isoform X1.
   
 
 0.946
DDX49
Probable ATP-dependent RNA helicase DDX49.
   
 
 0.945
DDX10
Probable ATP-dependent RNA helicase DDX10.
   
 
 0.943
NGDN
U3 small nucleolar ribonucleoprotein protein LCP5.
   
 
 0.935
BYSL
Essential nuclear protein 1.
   
 
 0.931
UTP25
U3 small nucleolar RNA-associated protein 25.
   
 
 0.927
NOP14
NOP14 nucleolar protein.
   
 
 0.924
UTP6
U3 small nucleolar RNA-associated protein 6 homolog isoform X1.
   
 
 0.923
PWP2
Periodic tryptophan protein 2 homolog.
   
 
 0.920
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.