STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDKAL1Threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1. (577 aa)    
Predicted Functional Partners:
PLA2G6
85/88 kDa calcium-independent phospholipase A2 isoform X1.
      
 0.665
AIFM2
Apoptosis-inducing factor 2.
      
 0.664
FTO
Alpha-ketoglutarate-dependent dioxygenase FTO isoform X1.
      
 0.641
EXOSC3
Exosome complex component RRP40.
    
 
 0.637
MMS19
MMS19 nucleotide excision repair protein homolog.
   
 
 0.632
TMLHE
Trimethyllysine dioxygenase, mitochondrial.
      
 0.626
SLC30A8
Solute carrier family 30 member 8.
      
 0.596
HHEX
Hematopoietically-expressed homeobox protein HHEX isoform X1.
      
 0.587
TRMT10A
TRNA methyltransferase 10 homolog A isoform X1.
   
  
 0.580
KCNJ11
Potassium inwardly-rectifying channel subfamily J member 11.
      
 0.560
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.