STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX4Transcription factor SOX4 (SOX group C). (442 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1 isoform X1.
    
 0.544
LEF1
Lymphoid enhancer binding factor 1.
    
0.523
TCF7
Transcription factor 7 isoform X1.
    
0.521
JUP
Junction plakoglobin isoform X1.
    
 0.502
LOC110070984
POU domain, class 5, transcription factor 1-like isoform X1.
    
 0.497
TCF7L2
Transcription factor 7-like 2 isoform X1.
    
0.433
TCF7L1
Transcription factor 7-like 1.
    
0.433
SOX14
Transcription factor SOX1/3/14/21 (SOX group B).
   
 
0.419
GYS1
Glycogen [starch] synthase, muscle.
    
 
 0.414
GYS2
Glycogen [starch] synthase, liver.
    
 
 0.414
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.