STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLXNA1Plexin-A1 isoform X1. (1889 aa)    
Predicted Functional Partners:
NRP1
Neuropilin-1 isoform X1.
   
 0.833
SEMA3A
Semaphorin-3A.
    
 0.682
SEMA3B
Semaphorin-3B.
    
 0.682
SEMA3E
Semaphorin-3E.
    
 0.626
SEMA7A
Semaphorin-7A-like.
    
 0.618
LOC110081495
Semaphorin-7A-like isoform X1.
    
 0.618
RND2
Rho-related GTP-binding protein RhoN.
    
 0.590
SEMA4D
Semaphorin-4D-like.
    
 0.583
SEMA3G
Semaphorin-3G.
    
 0.565
JAKMIP1
Dihydropyrimidinase-related protein 1.
   
 
 0.562
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.