STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCARA5Scavenger receptor class A member 5. (495 aa)    
Predicted Functional Partners:
SPTLC1
Serine palmitoyltransferase 1.
      
 0.860
GUK1
Guanylate kinase isoform X1.
    
 0.796
DAXX
Death domain-associated protein 6 isoform X1.
   
 0.711
CALML6
Calmodulin-like protein 6.
    
 
 0.710
TAPBP
TAP binding protein (tapasin).
    
 0.709
MMACHC
Cyanocobalamin reductase (cyanide-eliminating) / alkylcobalamin dealkylase.
      
 0.616
C1S
Complement component 1, s subcomponent.
   
 0.598
APOB
LOW QUALITY PROTEIN: apolipoprotein B-100.
     
 0.595
MRPL55
39S ribosomal protein L55, mitochondrial.
      
 0.591
HSP90B1
Heat shock protein 90kDa beta.
    
  0.589
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.