STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC63Translocation protein SEC63 homolog. (758 aa)    
Predicted Functional Partners:
SEC61A2
Protein transport protein SEC61 subunit alpha.
   
 0.999
SEC61A1
Protein transport protein SEC61 subunit alpha.
   
 0.999
SEC61B
Protein transport protein SEC61 subunit beta.
    
 0.999
SEC62
Translocation protein SEC62 isoform X1.
   
 0.999
SEC61G
Protein transport protein SEC61 subunit gamma and related proteins.
    
 0.999
ENSPVIP00000005817
annotation not available
     
 0.963
ENSPVIP00000024119
annotation not available
     
0.963
SNRNP200
U5 small nuclear ribonucleoprotein 200 kDa helicase.
     
 0.963
ANKRD45
Ankyrin repeat domain-containing protein 45 isoform X1.
  
 
 0.952
HSPA5
Endoplasmic reticulum chaperone BiP.
  
 
 0.952
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.