STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MATN1Cartilage matrix protein. (482 aa)    
Predicted Functional Partners:
LUM
Lumican.
   
 0.623
ENPP5
Ectonucleotide pyrophosphatase/phosphodiesterase family member 5 isoform X1.
      
 0.568
PCSK4
Proprotein convertase subtilisin/kexin type 4.
   
 0.542
FURIN
Furin-like.
   
 0.542
ACAN
Aggrecan core protein isoform X1.
   
 0.467
TGFB3
Transforming growth factor beta-3 isoform X1.
   
 0.465
ITGB6
Integrin beta 6.
    
 0.457
MFAP2
Microfibril associated protein 2.
   
 0.455
LOC110075916
Extracellular serine/threonine protein kinase FAM20C-like.
    
  0.434
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
    
 0.430
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.