STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCLRE1B5' exonuclease Apollo isoform X1. (571 aa)    
Predicted Functional Partners:
XRCC6
X-ray repair cross-complementing protein 6 isoform X1.
   
 0.862
XRCC5
X-ray repair cross-complementing protein 5.
    
 0.861
CPSF1
Cleavage and polyadenylation specificity factor subunit 1 isoform X1.
   
 0.821
ENSPVIP00000020409
annotation not available
   
 0.813
FANCM
Fanconi anemia group M protein.
   
 0.813
SYMPK
Symplekin.
   
 0.801
INTS4
Integrator complex subunit 4-like.
   
 0.801
LIG4
DNA ligase 4 isoform X1.
  
 0.775
MSH2
DNA mismatch repair protein MSH2.
   
 0.751
MUS81
MUS81 structure-specific endonuclease subunit.
   
 0.749
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.