Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PLEKHF1Pleckstrin homology domain-containing family F member 1. (269 aa)    
Predicted Functional Partners:
ZADH2
Prostaglandin reductase 3 isoform X1.
      
 0.566
SMDT1
Essential MCU regulator, mitochondrial.
    
 0.539
KCTD11
BTB/POZ domain-containing protein KCTD11.
      
 0.509
NDFIP2
NEDD4 family-interacting protein 2 isoform X1.
    
 
 0.494
RRAGB
Ras-related GTP-binding protein A/B.
    
 
 0.493
GGCT
Gamma-glutamylcyclotransferase isoform X1.
      
 0.484
SLC29A4
Solute carrier family 29 (equilibrative nucleoside transporter), member 4.
   
  
 0.462
GLIPR2
Golgi-associated plant pathogenesis-related protein 1 isoform X1.
    
 
 0.462
NEDD9
Enhancer of filamentation 1 isoform X1.
    
 
 0.448
RASD1
RAS, dexamethasone-induced Ras-related protein 1.
     
 0.442
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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