STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NR2E1Nuclear receptor subfamily 2 group E member 1. (385 aa)    
Predicted Functional Partners:
KDM1A
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase.
    
 0.889
ATN1
Atrophin-1 (dentatorubral-pallidoluysian atrophy protein).
    
 0.831
RERE
Arginine-glutamic acid dipeptide repeats.
    
 0.831
MED1
Mediator of RNA polymerase II transcription subunit 1.
    
  0.679
RCVRN
Recoverin.
   
 
 0.656
BCL11A
B-cell lymphoma/leukemia 11A isoform X1.
    
 0.632
CNOT3
CCR4-NOT transcription complex subunit 3 isoform X1.
      
 0.611
CABP4
Calcium-binding protein 1/2/4/5.
    
 
 0.573
PRPF31
U4/U6 small nuclear ribonucleoprotein PRP31.
    
 
 0.571
NRL
Neural retina-specific leucine zipper protein.
   
 0.562
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.