Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFG1LLactation elevated protein 1 isoform X1. (474 aa)    
Predicted Functional Partners:
UPB1
Beta-ureidopropionase.
      
 0.693
GUCD1
Protein GUCD1 isoform X1.
      
 0.693
DTNBP1
Dysbindin.
      
 0.624
DMGDH
Dimethylglycine dehydrogenase, mitochondrial isoform X1.
      
 0.616
ICE2
Little elongation complex subunit 2.
      
 0.594
BCAS3
Breast carcinoma-amplified sequence 3 isoform X1.
      
 0.592
SUSD2
Sushi domain-containing protein 2.
      
 0.572
MRPS9
28S ribosomal protein S9, mitochondrial isoform X1.
  
   0.570
USP45
Ubiquitin carboxyl-terminal hydrolase 45 isoform X1.
      
 0.543
MIPOL1
Mirror-image polydactyly gene 1 protein isoform X1.
      
 0.543
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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