STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHAXPhosphorylated adapter RNA export protein. (402 aa)    
Predicted Functional Partners:
SRRT
Serrate RNA effector molecule homolog isoform X1.
   
 0.973
NCBP2
Nuclear cap-binding protein subunit 2.
   
 0.962
NCBP1
Nuclear cap-binding protein subunit 1.
   
 0.929
RAN
GTP-binding nuclear protein Ran.
    
 0.903
PCF11
Pre-mRNA cleavage complex 2 protein Pcf11.
   
 0.704
XPO1
Exportin-1.
    
 
 0.688
NAA25
N-alpha-acetyltransferase 25, NatB auxiliary subunit isoform X1.
      
 0.569
UBE2J1
Ubiquitin-conjugating enzyme E2 J1 isoform X1.
      
 0.566
SGTB
Small glutamine-rich tetratricopeptide repeat-containing protein beta.
      
 0.565
NOLC1
Nucleolar and coiled-body phosphoprotein 1 isoform X1.
      
 0.563
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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