STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CARMIL1F-actin-uncapping protein LRRC16A isoform X1. (1382 aa)    
Predicted Functional Partners:
CAPZB
Capping actin protein of muscle Z-line subunit beta.
    
 0.888
CAPZA1
Capping protein (actin filament) muscle Z-line, alpha.
    
 0.820
ZNF341
Zinc finger protein 341.
      
 0.741
CAPZA3
Capping actin protein of muscle Z-line subunit alpha 3.
    
 0.670
CAPZA2
Capping protein (actin filament) muscle Z-line, alpha.
    
 0.670
OTULIN
Ubiquitin thioesterase otulin isoform X1.
      
 0.613
DCTN1
Dynactin subunit 1.
    
   0.553
COX18
Mitochondrial inner membrane protein COX18 isoform X1.
      
 0.546
NUBPL
ATP-binding protein involved in chromosome partitioning.
      
 0.522
LOC110089431
Uncharacterized protein LOC110089431.
    
  0.501
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.