STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR13WD repeat-containing protein 13 isoform X1. (524 aa)    
Predicted Functional Partners:
GCN1
EIF-2-alpha kinase activator GCN1.
    
 
 0.710
TBC1D25
TBC1 domain family member 25 isoform X1.
   
  
 0.701
TSPYL1
Protein SET-like.
    
 
 0.679
UNC79
Protein unc-79 homolog isoform X1.
    
 0.652
EBPL
Emopamil-binding protein-like.
      
 0.646
FTSJ1
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase.
    
 
 0.621
LOC110080195
Green-sensitive opsin.
     
 0.619
RHO
Rhodopsin.
     
 0.619
XRCC5
X-ray repair cross-complementing protein 5.
    
 0.576
TNFRSF6B
Tumor necrosis factor receptor superfamily member 6B.
      
 0.567
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.