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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRH1Probable peptidyl-tRNA hydrolase isoform X1. (228 aa)    
Predicted Functional Partners:
OLA1
Obg-like ATPase 1 isoform X1.
  
  
 0.948
MRPL58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
  
  
 0.849
GATB
Aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B.
  
 
  0.822
PCNA
Proliferating cell nuclear antigen isoform X1.
     
 0.723
GMPS
GMP synthase [glutamine-hydrolyzing] isoform X1.
  
  
 0.712
MRPL9
39S ribosomal protein L9, mitochondrial.
  
  
 0.707
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
  
  
 0.699
MRRF
Ribosome-recycling factor, mitochondrial isoform X1.
  
  
 0.683
TRIT1
TRNA dimethylallyltransferase, mitochondrial.
   
  
 0.682
MRPL27
39S ribosomal protein L27, mitochondrial.
  
  
 0.681
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.