Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTRH1Probable peptidyl-tRNA hydrolase isoform X1. (228 aa)    
Predicted Functional Partners:
OLA1
Obg-like ATPase 1 isoform X1.
  
  
 0.817
GATB
Aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B.
  
 
 0.785
PPP1R26
Protein phosphatase 1 regulatory subunit 26.
  
  
 0.703
CABP4
Calcium-binding protein 1/2/4/5.
      
 0.675
LOC110070791
Cytoplasmic tRNA 2-thiolation protein 1-like.
  
  
 0.646
LOC110088168
Cytoplasmic tRNA 2-thiolation protein 1-like.
  
  
 0.646
ENSPVIP00000012528
annotation not available
     
 0.577
PPA2
Inorganic pyrophosphatase 2, mitochondrial isoform X1.
     
 0.577
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
  
  
 0.574
RNF170
E3 ubiquitin-protein ligase RNF170 isoform X1.
   
  
 0.571
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.