STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC16Tetratricopeptide repeat protein 16. (527 aa)    
Predicted Functional Partners:
LEO1
RNA polymerase-associated protein LEO1.
    
 0.873
MDH1B
Putative malate dehydrogenase 1B isoform X1.
   
  
 0.617
YME1L1
ATP-dependent zinc metalloprotease YME1L1 isoform X1.
    
 
 0.616
STON2
Stonin-2 isoform X1.
      
 0.597
ENSPVIP00000030718
annotation not available
    
 0.591
TEP1
Telomerase protein component 1 isoform X1.
    
 0.591
SAP18
Histone deacetylase complex subunit SAP18.
   
 
 0.583
CDC73
Parafibromin.
    
 0.571
FOXN3
Forkhead box protein N3-like.
    
 
 0.568
CDC16
Cell division cycle protein 16 homolog.
    
 0.568
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.