Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PARD6GPartitioning defective 6 homolog gamma. (383 aa)    
Predicted Functional Partners:
CDC42
Cell division control protein 42 homolog isoform X1.
    
 0.988
PRKCZ
Protein kinase C zeta type isoform X1.
    
 0.985
PRKCI
Atypical protein kinase C iota type.
    
 0.985
PARD6A
Partitioning defective 6 homolog alpha.
  
 
0.962
MPP5
MAGUK p55 subfamily member 5.
   
0.959
PARD3
Partitioning defective 3 homolog.
   
 0.913
PARD6B
Partitioning defective 6 homolog beta.
  
  
 
0.901
LLGL1
Lethal(2) giant larvae protein homolog 1.
    
 
 0.803
LLGL2
Lethal(2) giant larvae protein homolog 2 isoform X1.
    
 
 0.803
ENSPVIP00000000356
annotation not available
   
 0.753
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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