STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VARS2LOW QUALITY PROTEIN: valine--tRNA ligase, mitochondrial. (1125 aa)    
Predicted Functional Partners:
EEF1G
Elongation factor 1-gamma.
 
 
 
 0.950
VARS1
Valyl-tRNA synthetase.
  
0.930
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
  
 
 0.908
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
  
 
 0.905
DARS2
Aspartate--tRNA ligase, mitochondrial.
  
  
 0.870
MARS1
Methionine--tRNA ligase, cytoplasmic isoform X1.
  
 
 0.861
LARS1
Leucine--tRNA ligase, cytoplasmic isoform X1.
   
 
0.838
IARS1
Isoleucine--tRNA ligase, cytoplasmic.
  
 
0.838
IARS2
Isoleucine--tRNA ligase, mitochondrial.
  
 
0.833
LARS2
Probable leucine--tRNA ligase, mitochondrial.
   
 
0.803
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.