STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBFAPutative ribosome-binding factor A, mitochondrial. (370 aa)    
Predicted Functional Partners:
METTL15
Probable methyltransferase-like protein 15.
    
 
 0.936
TFB1M
Dimethyladenosine transferase 1, mitochondrial.
    
 
 0.884
MRPS18C
28S ribosomal protein S18c, mitochondrial.
   
   0.866
MRPS7
28S ribosomal protein S7, mitochondrial.
    
   0.858
MRPS11
28S ribosomal protein S11, mitochondrial.
    
   0.858
MRPS5
28S ribosomal protein S5, mitochondrial.
    
   0.858
MRPS12
28S ribosomal protein S12, mitochondrial.
    
   0.858
MRM2
23S rRNA (uridine2552-2'-O)-methyltransferase.
   
  
 0.772
DAP3
28S ribosomal protein S29, mitochondrial.
    
 
 0.760
MRPS34
28S ribosomal protein S34, mitochondrial isoform X1.
   
 
 0.748
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.