STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A5Solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 5. (460 aa)    
Predicted Functional Partners:
RRAGB
Ras-related GTP-binding protein A/B.
    
 0.512
LAMTOR2
Ragulator complex protein LAMTOR2.
    
 0.506
FTSJ1
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase.
      
 0.426
MFSD2A
Sodium-dependent lysophosphatidylcholine symporter 1 isoform X1.
      
 0.417
LAMTOR1
Ragulator complex protein LAMTOR1.
    
 0.411
LAMTOR5
Ragulator complex protein LAMTOR5.
    
 0.410
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.