Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TBC1D25TBC1 domain family member 25 isoform X1. (685 aa)    
Predicted Functional Partners:
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
   
 0.949
RAB33B
Ras-related protein Rab-33B.
     
 0.946
RAB33A
Ras-related protein Rab-33A isoform X1.
     
 0.921
GABARAP
Gamma-aminobutyric acid receptor-associated protein.
   
 0.842
GABARAPL1
Gamma-aminobutyric acid receptor-associated protein-like 1.
   
 0.842
WDR13
WD repeat-containing protein 13 isoform X1.
   
  
 0.701
FTSJ1
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase.
      
 0.695
EBPL
Emopamil-binding protein-like.
      
 0.693
MAP1LC3A
Microtubule-associated proteins 1A/1B light chain 3A.
   
 0.676
MAP1LC3B
Microtubule-associated proteins 1A/1B light chain 3B.
   
 0.676
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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