STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUBCNRubicon autophagy regulator. (950 aa)    
Predicted Functional Partners:
UVRAG
UV radiation resistance-associated gene protein isoform X1.
    
 
 0.970
BECN1
Beclin-1.
    
 
 0.937
ENSPVIP00000014302
Phosphatidylinositol 3-kinase catalytic subunit type 3-like.
    
 
 0.853
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.853
RAB7A
Ras-related protein Rab-7A.
    
 
 0.801
PIK3R4
Phosphoinositide-3-kinase, regulatory subunit 4.
    
 
 0.796
ATG14
Beclin 1-associated autophagy-related key regulator.
    
 
 0.695
OSTM1
Osteopetrosis-associated transmembrane protein 1 (chloride channel 7 beta subunit).
   
  
 0.557
GLIPR2
Golgi-associated plant pathogenesis-related protein 1 isoform X1.
      
 0.550
AMBRA1
Autophagy and beclin 1 regulator 1.
   
 
 0.524
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.