close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXNL4AThioredoxin-like protein 4A isoform X1. (142 aa)    
Predicted Functional Partners:
PRPF6
pre-mRNA processing factor 6.
    
 0.999
DDX23
Probable ATP-dependent RNA helicase DDX23.
    
 0.995
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
    
 0.994
CD2BP2
CD2 antigen cytoplasmic tail-binding protein 2 isoform X1.
    
 0.993
SNRNP40
U5 small nuclear ribonucleoprotein 40 kDa protein.
    
 0.993
PRPF31
U4/U6 small nuclear ribonucleoprotein PRP31.
    
 0.989
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
 0.989
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.988
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
  0.987
LSM8
LSM8 homolog, U6 small nuclear RNA associated.
   
 0.985
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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