STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SND1Staphylococcal nuclease and tudor domain containing 1. (892 aa)    
Predicted Functional Partners:
LRRC59
Leucine-rich repeat-containing protein 59.
   
 
 0.917
RPS20
Small subunit ribosomal protein S20e.
    
   0.878
ENSPVIP00000009521
annotation not available
   
 
 0.866
RPS2
Small subunit ribosomal protein S2e.
   
 
 0.866
ENSPVIP00000005928
annotation not available
    
 
 0.865
RPS9
Small subunit ribosomal protein S9e.
    
 
 0.865
AXL
Tyrosine-protein kinase receptor UFO isoform X1.
   
  
 0.825
RPS3
Small subunit ribosomal protein S3e.
   
 
 0.805
NUDCD1
NudC domain-containing protein 1 isoform X1.
    
   0.797
SERBP1
Plasminogen activator inhibitor 1 RNA-binding protein isoform X1.
   
 
 0.760
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.