Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDGFDPlatelet derived growth factor C/D. (378 aa)    
Predicted Functional Partners:
PDGFC
Platelet-derived growth factor C isoform X1.
     
0.989
PDGFB
Platelet-derived growth factor subunit B isoform X1.
     
 0.988
PDGFRB
Platelet-derived growth factor receptor beta.
    
 0.965
PDGFA
Platelet-derived growth factor subunit A.
     
 0.963
PDGFRA
LOW QUALITY PROTEIN: platelet-derived growth factor receptor alpha.
    
 0.954
EGF
LOW QUALITY PROTEIN: pro-epidermal growth factor.
     
 0.911
EGFR
Epidermal growth factor receptor.
     
 0.904
DCTN5
Dynactin subunit 5.
    
   0.897
DCTN1
Dynactin subunit 1.
    
 
 0.894
DCTN6
Dynactin subunit 6.
    
   0.891
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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