STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PACC1Transmembrane protein 206. (346 aa)    
Predicted Functional Partners:
LARP1B
La-related protein 1B isoform X1.
      
 0.679
JADE1
Protein Jade-1 isoform X1.
      
 0.679
NENF
Neudesin.
      
 0.572
MANSC1
MANSC domain-containing protein 1.
      
 0.562
ENSPVIP00000022803
Uncharacterized protein KIAA1210 homolog.
      
 0.559
CYB5D2
Neuferricin isoform X1.
      
 0.558
TMEM171
Transmembrane protein 171.
      
 0.558
RETREG3
Protein FAM134C isoform X1.
      
 0.479
FAM189A2
Protein FAM189A2-like.
      
 0.463
CAMKK2
Calcium/calmodulin-dependent protein kinase kinase 2.
      
 0.408
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.