STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASQ2Calsequestrin 2. (394 aa)    
Predicted Functional Partners:
TRDN
Triadin.
   
 0.986
ENSPVIP00000014898
annotation not available
     
 0.936
RYR1
Ryanodine receptor 1.
   
 0.934
RYR2
Ryanodine receptor 2.
   
 0.934
CASQ1
Calsequestrin 1.
  
  
 
0.901
MYOZ1
Myozenin-1 isoform X1.
   
  
 0.751
AMPD1
AMP deaminase 1 isoform X1.
   
  
 0.699
MYOM2
Myomesin-2.
   
 
 0.699
MYLPF
Myosin regulatory light chain 2, skeletal muscle isoform.
   
 
 0.642
MYL1
Myosin light chain 1/3, skeletal muscle isoform isoform X1.
   
 
 0.635
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.