Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDHD1WD repeat and HMG-box DNA-binding protein 1. (1142 aa)    
Predicted Functional Partners:
POLA1
DNA polymerase alpha catalytic subunit.
   
 
 0.992
MCM2
DNA replication licensing factor MCM2.
   
 
 0.988
MCM6
DNA replication licensing factor MCM6.
   
 
 0.986
MCM4
DNA replication licensing factor MCM4.
   
 
 0.986
MCM5
DNA replication licensing factor MCM5.
   
 
 0.985
MCM3
DNA replication licensing factor MCM3.
   
 
 0.981
CHTF18
Chromosome transmission fidelity factor 18.
   
 
 0.975
TIMELESS
Protein timeless homolog isoform X1.
   
 
 0.969
PRIM2
DNA primase large subunit-like.
   
 
 0.968
CDC45
Cell division control protein 45 homolog.
   
 
 0.966
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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