STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCC1GRIP and coiled-coil domain-containing protein 1. (795 aa)    
Predicted Functional Partners:
BYSL
Essential nuclear protein 1.
   
 0.941
TSR1
Pre-rRNA-processing protein TSR1 homolog.
   
 0.918
NOB1
RNA-binding protein NOB1.
   
 0.916
LTV1
Protein LTV1 homolog.
   
 0.900
RIOK2
Serine/threonine-protein kinase RIO2.
   
 0.899
TMF1
TATA element modulatory factor.
     
 0.880
RIOK1
RIO kinase 1.
   
 0.877
AATF
Protein AATF/BFR2.
   
 
 0.867
GCC2
GRIP and coiled-coil domain-containing protein 2.
     
 0.858
IMP3
U3 small nucleolar ribonucleoprotein protein IMP3.
   
 0.855
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.