Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DENND6BProtein DENND6B. (541 aa)    
Predicted Functional Partners:
RUSC2
RUN and SH3 domain containing 2.
      
 0.692
PRORP
Mitochondrial ribonuclease P protein 3.
      
 0.624
ATP6V1F
V-type H+-transporting ATPase subunit F.
      
 0.613
OCRL
Inositol polyphosphate 5-phosphatase INPP5B/F.
      
 0.571
UACA
Uveal autoantigen with coiled-coil domains and ankyrin repeats isoform X1.
      
 0.570
SDK1
Protein sidekick-1 isoform X1.
      
 0.569
SDK2
Protein sidekick-2 isoform X1.
      
 0.569
PSAT1
Phosphoserine aminotransferase.
      
 0.483
DENND1A
DENN domain-containing protein 1A isoform X1.
      
 0.472
TRAPPC6B
Trafficking protein particle complex subunit 6B.
      
 0.439
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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