STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RD3Protein RD3. (197 aa)    
Predicted Functional Partners:
EIF2B1
Translation initiation factor eIF-2B subunit alpha isoform X1.
    
   0.888
SUCO
SUN domain-containing ossification factor isoform X1.
      
 0.883
SPATA7
Spermatogenesis-associated protein 7.
      
 0.695
RPGRIP1
RPGR interacting protein 1.
      
 0.676
LCA5
Lebercilin LCA5.
      
 0.672
SLC30A1
Solute carrier family 30 (zinc transporter), member 1.
      
 0.663
LOC110071575
Protein regulator of cytokinesis 1-like.
      
 0.630
IQCB1
IQ calmodulin-binding motif-containing protein 1.
      
 0.625
ENSPVIP00000032589
annotation not available
      
 0.622
PDE6B
Phosphodiesterase 6B.
    
 
 0.604
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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