STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RD3Protein RD3. (197 aa)    
Predicted Functional Partners:
LPGAT1
Acyl-CoA:lysophosphatidylglycerol acyltransferase 1.
      
 0.679
SUCO
SUN domain-containing ossification factor isoform X1.
      
 0.668
SPATA7
Spermatogenesis-associated protein 7.
      
 0.582
RPGRIP1
RPGR interacting protein 1.
      
 0.560
LCA5
Lebercilin LCA5.
      
 0.559
KCNS3
Potassium voltage-gated channel delayed-rectifier subfamily S member 3.
      
 0.521
NEK2
NIMA (never in mitosis gene a)-related kinase 2.
      
 0.514
FGF5
Fibroblast growth factor 5.
      
 0.511
PDE6B
Phosphodiesterase 6B.
    
 
 0.499
ENSPVIP00000032589
annotation not available
      
 0.495
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.