STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOP56Nucleolar protein 56. (436 aa)    
Predicted Functional Partners:
SNU13
U4/U6 small nuclear ribonucleoprotein SNU13.
   
 0.999
NOP58
Nucleolar protein 58 isoform X1.
   
 0.999
FBL
RRNA 2'-O-methyltransferase fibrillarin.
   
 0.999
RRP9
U3 small nucleolar RNA-interacting protein 2 isoform X1.
   
 0.996
UTP15
U3 small nucleolar RNA-associated protein 15 homolog.
   
 0.996
DKC1
H/ACA ribonucleoprotein complex subunit 4 isoform X1.
   
 
 0.995
NOLC1
Nucleolar and coiled-body phosphoprotein 1 isoform X1.
   
 
 0.995
WDR43
U3 small nucleolar RNA-associated protein 5.
   
 0.993
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
 
 0.991
UTP4
U3 small nucleolar RNA-associated protein 4 homolog.
   
 0.990
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.