Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TRERF1Transcriptional-regulating factor 1 isoform X1. (1172 aa)    
Predicted Functional Partners:
DNTTIP1
Deoxynucleotidyltransferase terminal-interacting protein 1.
    
 
 0.984
ELMSAN1
ELM2 and SANT domain-containing protein 1 isoform X1.
    
 
 0.899
C6orf132
Uncharacterized protein C6orf132 homolog isoform X1.
      
 0.819
CYP39A1
24-hydroxycholesterol 7-alpha-hydroxylase isoform X1.
      
 0.727
TAF8
Transcription initiation factor TFIID subunit 8 isoform X1.
      
 0.697
TXLNA
Alpha-taxilin isoform X1.
      
 0.682
DENND2D
DENN domain-containing protein 2D isoform X1.
      
 0.679
KCTD19
Potassium channel tetramerization domain containing 19.
      
 0.626
IKZF2
Zinc finger protein Helios isoform X1.
    
 
 0.591
MAP3K8
Mitogen-activated protein kinase kinase kinase 8.
      
 0.585
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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