STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRERF1Transcriptional-regulating factor 1 isoform X1. (1172 aa)    
Predicted Functional Partners:
DNTTIP1
Deoxynucleotidyltransferase terminal-interacting protein 1.
    
 
 0.789
LOC110089198
Ribosome biogenesis protein SSF1/2.
      
 0.679
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3 isoform X1.
      
 0.679
MBNL1
Muscleblind-like protein 1 isoform X1.
      
 0.679
KCTD19
Potassium channel tetramerization domain containing 19.
      
 0.679
ENSPVIP00000005817
annotation not available
      
 0.561
ENSPVIP00000024119
annotation not available
      
 0.561
SNRNP200
U5 small nuclear ribonucleoprotein 200 kDa helicase.
      
 0.561
ELMSAN1
ELM2 and SANT domain-containing protein 1 isoform X1.
    
 
0.521
CCDC51
Coiled-coil domain-containing protein 51.
      
 0.503
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.