STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX8LIM/homeobox protein Lhx8 isoform X1. (381 aa)    
Predicted Functional Partners:
FIGLA
Factor in the germline alpha.
   
 0.794
LDB1
LIM domain-binding protein 1 isoform X1.
    
 0.747
LDB2
LIM domain-binding protein 2 isoform X1.
    
 0.747
CRYZ
NADPH:quinone reductase.
    
 
 0.671
DLX1
Homeobox protein DLX1/4/6.
   
 
 0.605
SST
Somatostatin.
      
 0.593
ENTPD5
Ectonucleoside triphosphate diphosphohydrolase 5/6.
   
  
 0.569
ENSPVIP00000027883
annotation not available
      
 0.564
BARX1
Homeobox protein BarH-like 1.
    
 0.562
DLX2
Homeobox protein DLX-2.
   
 
 0.542
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.