Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PEX11APeroxisomal membrane protein 11A. (247 aa)    
Predicted Functional Partners:
PEX11G
Peroxisomal membrane protein 11C.
    
 0.953
PEX19
Peroxisomal biogenesis factor 19.
   
 0.936
PEX11B
Peroxisomal membrane protein 11B.
  
  
 
0.902
PEX13
Peroxisome biogenesis factor 13.
   
 0.900
PEX12
Peroxisome assembly protein 12.
   
 0.894
PEX3
Peroxisomal biogenesis factor 3.
   
 0.894
PEX14
Peroxisomal membrane protein PEX14.
    
 0.891
PEX10
Peroxisome biogenesis factor 10.
    
 
 0.788
FAM185A
Protein FAM185A.
    
 0.766
PEX16
Peroxisomal biogenesis factor 16.
   
 
 0.738
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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