Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PIKFYVE1-phosphatidylinositol 3-phosphate 5-kinase isoform X1. (2132 aa)    
Predicted Functional Partners:
FIG4
Phosphatidylinositol 3,5-bisphosphate 5-phosphatase.
    
 0.999
ENSPVIP00000024485
annotation not available
    
 0.982
VAC14
Vacuole morphology and inheritance protein 14.
    
 0.982
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.958
MTMR2
Myotubularin-related protein 1/2.
     
 0.949
MTMR1
Myotubularin-related protein 1 isoform X1.
     
 0.949
PI4KB
Phosphatidylinositol 4-kinase beta isoform X1.
     
 0.946
PI4KA
Phosphatidylinositol 4-kinase alpha.
     
 0.940
SACM1L
Phosphatidylinositide phosphatase SAC1.
    
 0.935
MTM1
Myotubularin isoform X1.
     
 0.934
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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