Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110070123Ras-related protein Rab-39B-like. (308 aa)    
Predicted Functional Partners:
LOC110070577
Rab proteins geranylgeranyltransferase component A 2-like.
    
 0.574
CHM
Rab proteins geranylgeranyltransferase component A 1.
    
 0.574
ITSN2
Intersectin-2 isoform X1.
    
 0.572
LOC110090973
Ras-related protein Rab-14-like.
  
 
 
0.565
PTAR1
Protein prenyltransferase alpha subunit repeat-containing protein 1 isoform X1.
    
 0.540
RABGGTA
Geranylgeranyl transferase type-2 subunit alpha.
    
 0.540
ENSPVIP00000015452
annotation not available
    
 0.523
GDI2
Rab GDP dissociation inhibitor beta isoform X1.
    
 0.514
GDI1
Rab GDP dissociation inhibitor alpha.
    
 0.514
RABGGTB
Geranylgeranyl transferase type-2 subunit beta.
    
 0.509
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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