STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110070123Ras-related protein Rab-39B-like. (308 aa)    
Predicted Functional Partners:
ITSN2
Intersectin-2 isoform X1.
    
 0.851
ITSN1
Intersectin-1 isoform X1.
    
 0.750
ENSPVIP00000015452
annotation not available
   
 0.675
LOC110070577
Rab proteins geranylgeranyltransferase component A 2-like.
    
 0.651
CHM
Rab proteins geranylgeranyltransferase component A 1.
    
 0.651
GDI2
Rab GDP dissociation inhibitor beta isoform X1.
    
 0.632
GDI1
Rab GDP dissociation inhibitor alpha.
    
 0.632
COG6
Conserved oligomeric Golgi complex subunit 6.
    
 0.619
RABGGTB
Geranylgeranyl transferase type-2 subunit beta.
    
 0.611
ENSPVIP00000014724
annotation not available
    
 0.608
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.