STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110089640Uncharacterized protein LOC110089640. (1121 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase-associated protein 1.
   
 0.851
CUL1
Cullin-1 isoform X1.
    
 0.794
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.793
CUL3
Cullin-3 isoform X1.
    
 0.716
NEDD8
Ubiquitin-like protein Nedd8.
    
 0.633
UBC
Polyubiquitin-C.
   
 0.600
RPS27A
Ribosomal protein S27a.
    
 0.586
COMMD4
COMM domain-containing protein 4.
    
 0.528
PPP2R2B
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1.
    
 
 0.526
PPP2R2A
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1.
    
 
 0.526
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.