STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110089640Uncharacterized protein LOC110089640. (1121 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase-associated protein 1.
    
 0.869
CUL1
Cullin-1 isoform X1.
   
 0.859
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.811
CUL3
Cullin-3 isoform X1.
   
 0.615
LOC110087327
Baculoviral IAP repeat-containing protein 5.1-like.
    
 
 0.543
BIRC5
Baculoviral IAP repeat-containing protein 5.
    
 
 0.543
FBXO16
F-box only protein 16 isoform X1.
   
 0.532
UBC
Polyubiquitin-C.
    
 0.524
FAF1
FAS-associated factor 1 isoform X1.
   
 
 0.488
COMMD4
COMM domain-containing protein 4.
   
 0.487
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.