STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POLGDNA polymerase subunit gamma-1. (1198 aa)    
Predicted Functional Partners:
POLG2
DNA polymerase subunit gamma-2, mitochondrial.
    
 0.999
TWNK
Twinkle protein, mitochondrial.
   
 
 0.965
SSBP1
Single-stranded DNA-binding protein, mitochondrial isoform X1.
   
 0.933
GATC
Aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C.
    
 0.883
POLRMT
DNA-directed RNA polymerase, mitochondrial isoform X1.
   
 
 0.870
GARS1
Glycyl-tRNA synthetase.
    
 0.865
TFAM
Transcription factor A, mitochondrial.
    
 
 0.727
DGUOK
Deoxyguanosine kinase, mitochondrial.
   
  
 0.698
TLK1
Serine/threonine-protein kinase tousled-like 1.
      
 0.695
MPV17
Protein Mpv17.
      
 0.694
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.