STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD6IP-2Programmed cell death 6-interacting protein. (79 aa)    
Predicted Functional Partners:
CHMP4B
Charged multivesicular body protein 4b.
   
 0.981
CHMP4C
Charged multivesicular body protein 4c.
   
 0.981
CHMP4A
Charged multivesicular body protein 4a.
   
 0.949
MVB12B
Multivesicular body subunit 12B isoform X1.
     
 0.929
MVB12A
Multivesicular body subunit 12A.
     
 0.922
TSG101
Tumor susceptibility gene 101 protein isoform X1.
   
 0.861
LOC110088293
Magnesium-dependent phosphatase 1-like.
    
 0.789
CEP55
Centrosomal protein of 55 kDa isoform X1.
    
 
 0.722
VPS4A
Vacuolar protein sorting-associated protein 4A.
   
 0.678
HGS
Hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1.
   
 0.678
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.