STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD6IP-2Programmed cell death 6-interacting protein. (79 aa)    
Predicted Functional Partners:
TSG101
Tumor susceptibility gene 101 protein isoform X1.
   
 0.946
CEP55
Centrosomal protein of 55 kDa isoform X1.
    
 
 0.917
ALG2
Alpha-1,3/alpha-1,6-mannosyltransferase.
    
 
 0.857
LOC110088293
Magnesium-dependent phosphatase 1-like.
    
 0.842
CHMP4B
Charged multivesicular body protein 4b.
   
 0.766
CHMP4C
Charged multivesicular body protein 4c.
   
 0.766
VPS4A
Vacuolar protein sorting-associated protein 4A.
   
 0.745
VPS4B
Vacuolar protein sorting-associated protein 4B.
   
 0.745
PDCD6
Programmed cell death protein 6.
    
 
 0.741
PEF1
Peflin.
    
 
 0.741
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.