Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRTAPCartilage-associated protein. (419 aa)    
Predicted Functional Partners:
PPIB
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B).
   
 0.946
P3H1
Procollagen-proline 3-dioxygenase 1.
   
 0.779
P3H2
Prolyl 3-hydroxylase 2.
   
 0.779
P3H3
Procollagen-proline 3-dioxygenase 3.
   
 0.779
PPIC
Peptidyl-prolyl isomerase C (cyclophilin C).
   
 0.774
WDR19
WD repeat-containing protein 19 isoform X1.
      
 0.666
SERPINH1
Serpin peptidase inhibitor, clade H, member 1.
   
 
 0.660
ENSPVIP00000032589
annotation not available
      
 0.656
SLC26A2
Solute carrier family 26 (sulfate anion transporter), member 2.
      
 0.651
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 
 0.576
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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