STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP0000000329860 kDa lysophospholipase-like. (584 aa)    
Predicted Functional Partners:
ANAPC4
Anaphase-promoting complex subunit 4 isoform X1.
    
 
 0.873
GATB
Aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B.
    
 0.694
GMPS
GMP synthase [glutamine-hydrolyzing] isoform X1.
  
 
  0.675
L3HYPDH
Trans-3-hydroxy-L-proline dehydratase.
    
 0.649
BUB1
Mitotic checkpoint serine/threonine-protein kinase BUB1.
    
 
 0.635
BUB1B
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
    
 
 0.635
PPAT
Amidophosphoribosyltransferase isoform X1.
  
 
  0.634
FADS6
Fatty acid desaturase 6.
    
 0.618
FDXR
NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X1.
    
 0.618
CDC16
Cell division cycle protein 16 homolog.
    
   0.617
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.