Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
VAPBVesicle-associated membrane protein-associated protein B/C. (237 aa)    
Predicted Functional Partners:
VAPA
Vesicle-associated membrane protein-associated protein A.
   
 0.988
OSBPL9
Oxysterol-binding protein-related protein 9 isoform X1.
   
 
 0.969
PITPNM1
Membrane-associated phosphatidylinositol transfer protein 1 isoform X1.
    
 
 0.950
OSBPL1A
Oxysterol-binding protein-related protein 1 isoform X1.
    
 
 0.911
STARD3
StAR-related lipid transfer protein 3.
    
 
 0.886
RAB3GAP1
Rab3 GTPase-activating protein catalytic subunit isoform X1.
    
 
 0.862
OSBP2
Oxysterol-binding protein 2 isoform X1.
    
 
 0.834
WDR44
WD repeat domain 44.
   
 
 0.834
OSBP
Oxysterol-binding protein 1.
    
 
 0.834
RMDN3
Regulator of microtubule dynamics protein 3 isoform X1.
    
 0.831
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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