Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOXL1Lysyl oxidase-like protein 1. (607 aa)    
Predicted Functional Partners:
FBLN5
Fibulin 5.
   
 
 0.736
RNF17
Tudor domain-containing protein 1/4/6/7.
    
 
 0.695
ELN
Elastin.
    
 0.679
FBN1
Fibrillin-1 isoform X1.
   
  
 0.621
ENSPVIP00000000723
annotation not available
    
 0.588
CASP6
Caspase 6.
    
 0.588
FBLN1
Fibulin-1 isoform X1.
   
  
 0.531
FBLN2
Fibulin 1/2.
   
  
 0.496
LOC110082937
Erythrocyte band 7 integral membrane protein.
    
 0.490
ENSPVIP00000028737
Erythrocyte band 7 integral membrane protein-like.
    
 0.490
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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