STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUDS3Sin3 histone deacetylase corepressor complex component SDS3. (317 aa)    
Predicted Functional Partners:
RBBP4
Histone-binding protein RBBP4 isoform X1.
    
 0.991
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
   
 0.988
SAP18
Histone deacetylase complex subunit SAP18.
    
 0.973
SAP30
Histone deacetylase complex subunit SAP30.
   
 0.954
SAP30L
Histone deacetylase complex subunit SAP30L.
   
 0.954
SAP130
Histone deacetylase complex subunit SAP130 isoform X1.
   
 0.954
ING2
Inhibitor of growth protein 2.
    
 
 0.944
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
   
 0.933
SINHCAF
Protein FAM60A.
    
 
 0.930
SIN3A
Paired amphipathic helix protein Sin3a.
   
 0.918
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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