STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRRM4Serine/arginine repetitive matrix 4. (578 aa)    
Predicted Functional Partners:
SLC17A8
Vesicular glutamate transporter 3.
   
  
 0.661
MYO6
Unconventional myosin-VI isoform X1.
    
 0.637
WFS1
Wolframin.
      
 0.616
SLC26A5
Solute carrier family 26, member 5.
      
 0.606
PTBP2
Polypyrimidine tract-binding protein 2 isoform X1.
      
 0.583
ENSPVIP00000033449
annotation not available
    
 0.582
TMC1
Transmembrane channel like 1.
    
 0.549
TMC3
Transmembrane channel like 3.
    
 0.549
USH2A
LOW QUALITY PROTEIN: usherin.
      
 0.495
CMTR1
Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 isoform X1.
      
 0.477
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.